Amorim, J. P., Gali-Macedo, A., Marcelino, H., Bordeira-Carriço, R., Naranjo, S., Rivero-Gil, S., … Bessa, J. (2020). A Conserved Notochord Enhancer Controls Pancreas Development in Vertebrates. Cell Reports, 32(1). https://doi.org/10.1016/j.celrep.2020.107862

Cavadas, B., Camacho, R., Ferreira, J. C., Ferreira, R. M., Figueiredo, C., Brazma, A., … Pereira, L. (2020). Gastric Microbiome Diversities in Gastric Cancer Patients from Europe and Asia Mimic the Human Population Structure and Are Partly Driven by Microbiome Quantitative Trait Loci. Microorganisms, 8(8), 1196. https://doi.org/10.3390/microorganisms8081196

Corley, M. F. V., Rosete, J., & Ferreira, S. (2020). Mondeguina, a new genus for Apatetris mediterranella Nel & Varenne, 2012, with description of a new species from Portugal (Lepidoptera, Gelechiidae). Nota Lepidopterologica, 43, 151–166. https://doi.org/10.3897/nl.43.50430

da Silva, L. P., Mata, V. A., Lopes, P. B., Lopes, R. J., & Beja, P. (2020). High-resolution multi-marker DNA metabarcoding reveals sexual dietary differentiation in a bird with minor dimorphism. Ecology and Evolution, 10(19), 10364–10373. https://doi.org/10.1002/ece3.6687

Egeter, B., Veríssimo, J., Lopes-Lima, M., Chaves, C., Pinto, J., Riccardi, N., … Fonseca, N. (2020). Speeding up the detection of invasive aquatic species using environmental DNA and nanopore sequencing. BioRxiv, 2020.06.09.142521. https://doi.org/10.1101/2020.06.09.142521

Ferreira, Sonia, Andrade, R., Gonçalves, A., Sousa, P., Paupério, J., Fonseca, N., & Beja, P. (2020). The InBIO Barcoding Initiative Database: DNA barcodes of Portuguese Diptera 01. Biodiversity Data Journal, 8, e49985. https://doi.org/10.3897/bdj.8.e49985

Garcia-Raventós, A., Martins, F. M. S., Teixeira, A., Sousa, R., Froufe, E., Varandas, S., … Filipe, A. F. (2020). Origin and history of Phoxinus (Cyprinidae) introductions in the Douro Basin (Iberian Peninsula): an update inferred from genetic data. Biological Invasions, 22(8), 2409–2419. https://doi.org/10.1007/s10530-020-02279-5

Ikoyi, I., Egeter, B., Chaves, C., Ahmed, M., Fowler, A., & Schmalenberger, A. (2020). Responses of soil microbiota and nematodes to application of organic and inorganic fertilizers in grassland columns. Biology and Fertility of Soils, 1–16. https://doi.org/10.1007/s00374-020-01440-5

Martins, F. M. S., Porto, M., Feio, M. J., Egeter, B., Bonin, A., Serra, S. R. Q., … Beja, P. (2020). Modelling technical and biological biases in macroinvertebrate community assessment from bulk preservative using multiple metabarcoding markers. Molecular Ecology, mec.15620. https://doi.org/10.1111/mec.15620

Mata, V. A., Ferreira, S., Campos, R. M., Silva, L. P., Veríssimo, J., Corley, M. F. V., & Beja, P. (2020). Efficient assessment of nocturnal flying insect communities by combining automatic light traps and DNA metabarcoding. Environmental DNA, edn3.125. https://doi.org/10.1002/edn3.125

Oliveira, D., Ferreira, S. (2020). Wesmaelius (Kimninsia) nervosus (Fabricius, 1793) (Neuroptera, Hemerobiidae) a new species of brown lacewing for the Portuguese fauna. Boln. Asoc. esp. Ent., 44 (1-2): 00-00, 00-00-2020. http://www.entomologica.es/index.php?d=publications&num=76&w=1804&ft=1

Peixoto, S., Chaves, C., Velo‐Antón, G., Beja, P., & Egeter, B. (2020). Species detection from aquatic eDNA: Assessing the importance of capture methods. Environmental DNA, edn3.130. https://doi.org/10.1002/edn3.130

Teixeira, M., Martins, L., Fernandes, C., Chaves, C., Pinto, J., Tavares, F., & Fonseca, N. A. (2020). Complete Genome Sequences of Walnut-Associated Xanthomonas euroxanthea Strains CPBF 367 and CPBF 426 Obtained by Illumina/Nanopore Hybrid Assembly. Microbiology Resource Announcements, 9(45). https://doi.org/10.1128/mra.00902-20



Blackman, R., Mächler, E., Altermatt, F., Arnold, A., Beja, P., Boets, P., … Deiner, K. (2019). Advancing the use of molecular methods for routine freshwater macroinvertebrate biomonitoring – the need for calibration experiments. Metabarcoding and Metagenomics. https://doi.org/10.3897/mbmg.3.34735

Corley, M., & Ferreira, S. (2019). A taxonomic revision of the Western Palaearctic genus Cacochroa Heinemann, 1870 (Lepidoptera, Depressariidae, Cryptolechiinae) with description of a new genus and a new species. Zootaxa, 4683(2), 197–214. https://doi.org/10.11646/zootaxa.4683.2.2

Corley, M., Ferreira, S., & Mata, V. A. (2019). Ypsolopha rhinolophi sp. nov. (Lepidoptera: Ypsolophidae), a new species from Portugal and France unveiled by bats. Zootaxa, 4609(3), 565. https://doi.org/10.11646/zootaxa.4609.3.10

Corley, M. F. V., Buchner, P., & Ferreira, S. (2019). Depressaria infernella Corley & Buchner, a new Iberian species of the Depressaria douglasella group (Lepidoptera: Depressariidae). SHILAP Revista de Lepidopterología, 47(186), 293–300. https://www.redalyc.org/jatsRepo/455/45561111020/html/index.html

Corley, M. F. V, Nunes, J., Rosete, J., & Ferreira, S. (2019). New and interesting Portuguese Lepidoptera records from 2018 (Insecta: Lepidoptera). SHILAP Revista de Lepidopterologia, 47(188), 611–630. https://www.redalyc.org/jatsRepo/455/45562243008/45562243008.pdf

da Silva, L. P., Mata, V. A., Lopes, P. B., Pereira, P., Jarman, S. N., Lopes, R. J., & Beja, P. (2019). Advancing the integration of multi‐marker metabarcoding data in dietary analysis of trophic generalists. Molecular Ecology Resources. https://doi.org/10.1111/1755-0998.13060

Egeter, B., Roe, C., Peixoto, S., Puppo, P., Easton, L. J., Pinto, J., … Robertson, B. C. (2019). Using molecular diet analysis to inform invasive species management: A case study of introduced rats consuming endemic New Zealand frogs. Ecology and Evolution, 9(9), 5032–5048. https://doi.org/10.1002/ece3.4903

Ferreira, S., Paupério, J., Grosso-Silva, J. M., & Beja, P. (2019). DNA barcoding of Sialis sp. (Megaloptera) in Portugal: the missing tool to species identification. Aquatic Insects. https://doi.org/10.1080/01650424.2019.1571612

Fletcher, N. K., Acevedo, P., Herman, J. S., Paupério, J., Alves, P. C., & Searle, J. B. (2019). Glacial cycles drive rapid divergence of cryptic field vole species. Ecology and Evolution, 9(24), 14101–14113. https://doi.org/10.1002/ece3.5846

Lopes, R. J., Pinho, C. J., Santos, B., Seguro, M., Mata, V. A., Egeter, B., & Vasconcelos, R. (2019). Intricate trophic links between threatened vertebrates confined to a small island in the Atlantic Ocean. Ecology and Evolution, 9(8), 4994–5002. https://doi.org/10.1002/ece3.5105

Martins, F. M. S., Galhardo, M., Filipe, A. F., Teixeira, A., Pinheiro, P., Paupério, J., … Beja, P. (2019). Have the cake and eat it: Optimising non‐destructive DNA metabarcoding of macroinvertebrate samples for freshwater biomonitoring. Molecular Ecology Resources, 1755–0998.13012. https://doi.org/10.1111/1755-0998.13012

Proença-Ferreira, A., Ferreira, C., Leitão, I., Paupério, J., Sabino-Marques, H., Barbosa, S., … Pita, R. (2019). Drivers of survival in a small mammal of conservation concern: An assessment using extensive genetic non-invasive sampling in fragmented farmland. Biological Conservation, 230, 131–140. https://doi.org/10.1016/J.BIOCON.2018.12.021



Agostinho, M., Moniz Alves, C., Aresta, S., Borrego, F., Borlido-Santos, J., Cortez, J., … Vidal, S. (2018). The interface of science: the case for a broader definition of research management. Perspectives: Policy and Practice in Higher Education, 1–9. https://doi.org/10.1080/13603108.2018.1543215

Egeter, B., Peixoto, S., Brito, J. C., Jarman, S., Puppo, P., & Velo-Antón, G. (2018). Challenges for assessing vertebrate diversity in turbid Saharan water-bodies using environmental DNA. Genome, 61(11), 807–814. https://doi.org/10.1139/gen-2018-0071

Ferreira, C. M., Sabino-Marques, H., Barbosa, S., Costa, P., Encarnação, C., Alpizar-Jara, R., … Alves, P. C. (2018). Genetic non-invasive sampling (gNIS) as a cost-effective tool for monitoring elusive small mammals. European Journal of Wildlife Research, 64(4), 46. https://doi.org/10.1007/s10344-018-1188-8

Ferreira, Sonia, de Figueroa, J. M. T., Martins, F. M. S., Verissimo, J., Quaglietta, L., Grosso-Silva, J. M., … Beja, P. (2018). The InBIO barcoding initiative database: Contribution to the knowledge on DNA barcodes of Iberian Plecoptera. Biodiversity Data Journal, 8, 55137. https://doi.org/10.3897/BDJ.8.e55137

Mata, V. A., Rebelo, H., Amorim, F., Mccracken, G. F., Jarman, S., & Beja, P. (2018). How much is enough? Effects of technical and biological replication on metabarcoding dietary analysis. Molecular Ecology. https://doi.org/10.1111/mec.14779

Pawlowski, J., Kelly-Quinn, M., Altermatt, F., Apothéloz-Perret-Gentil, L., Beja, P., Boggero, A., … Kahlert, M. (2018). The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems. Science of The Total Environment, 637–638, 1295–1310. https://doi.org/10.1016/J.SCITOTENV.2018.05.002

Pinho, C. J., Santos, B., Mata, V. A., Seguro, M., Romeiras, M. M., Lopes, R. J., & Vasconcelos, R. (2018). What is the giant wall gecko having for dinner? Conservation genetics for guiding reserve management in cabo verde. Genes. https://doi.org/10.3390/genes9120599

Rebelo, H., Ferreira, S., Amorim, F., Horta, P., Raposeira, H., Santos, H., … Mata, V. A. (2018). Hidden in our pockets: Building of a DNA barcode library unveils the first record of Myotis alcathoe for Portugal. Biodiversity Data Journal, 8, 54479. https://doi.org/10.3897/BDJ.8.e54479



Corley, M. F. V., & Ferreira, S. (2017). DNA Barcoding reveals sexual dimorphism in Isotrias penedana Trematerra, 2013 (Lepidoptera: Tortricidae, Chlidanotinae) . Zootaxa. DOI: https://doi.org/10.11646/zootaxa.4221.5.7

Corley, M. F. V., Ferreira, S., Lvovsky, A. L., & Rosete, J. (2017). Borkhausenia crimnodes Meyrick, 1912 (Lepidoptera, Oecophoridae), a southern hemisphere species resident in Portugal. Nota Lepidopterologica, 40(1), 15–24. DOI: https://doi.org/10.3897/nl.40.10938

Curto, M., Puppo, P., Kratschmer, S., & Meimberg, H. (2017). Genetic diversity and differentiation patterns in Micromeria from the Canary Islands are congruent with multiple colonization dynamics and the establishment of species syngameons. BMC Evolutionary Biology, 17(1), 198. DOI: https://doi.org/10.1186/s12862-017-1031-y

Mata, V. A., Amorim, F., Guillén-Servent, A., Beja, P., & Rebelo, H. (2017). First complete mitochondrial genomes of molossid bats (Chiroptera: Molossidae). Mitochondrial DNA Part B, 2(1), 152–154. DOI: https://doi.org/10.1080/23802359.2017.1298419

McInnes, J. C., Alderman, R., Deagle, B. E., Lea, M.-A., Raymond, B., & Jarman, S. N. (2017). Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates. Methods in Ecology and Evolution, 8(2), 192–202. DOI: https://doi.org/10.1111/2041-210X.12677